Diels–alderase-free, bis-pericyclic, [4+2] dimerization in the biosynthesis of (±)-paracaseolide a

Diels–alderase-free, bis-pericyclic, [4+2] dimerization in the biosynthesis of (±)-paracaseolide a


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ABSTRACT The natural product paracaseolide A is a tetracyclic dilactone containing six adjacent stereocentres. Its skeleton occupies a unique structural space among the >200,000


characterized secondary metabolites. Six different research groups have reported a chemical synthesis of this compound, five of which used a thermal, net Diels–Alder [4+2] cycloaddition and


dehydration at 110 °C to access the target by dimerization of a simple butenolide precursor. Here, we report that this dimerization proceeds under much milder conditions and with a different


stereochemical outcome than previously recognized. This can be rationalized by invoking a bis-pericyclic transition state. Furthermore, we find that spontaneous epimerization, necessary to


correct the configuration at one key stereocentre, is viable and that natural paracaseolide A is racemic. Together, these facts point to the absence of enzymatic catalysis (that is,


Diels–Alderase activity) in the cycloaddition and strongly suggest that a non-enzyme-mediated dimerization is the actual event by which paracaseolide A is produced in nature. Access through


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CONTENT BEING VIEWED BY OTHERS _EXO_-SELECTIVE INTERMOLECULAR DIELS–ALDER REACTION BY PYRI4 AND ABNU ON NON-NATURAL SUBSTRATES Article Open access 03 August 2021 FUNCTIONAL CHARACTERIZATION


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February 2025 REFERENCES * Chen, X-L., Liu, H-L., Li, J., Xin, G-R. & Guo, Y-W. Paracaseolide A, first α-alkylbutenolide dimer with an unusual tetraquinane oxa-cage bislactone skeleton


from Chinese mangrove _Sonneratia paracaseolaris_. _Org. Lett_. 13, 5032–5035 (2011). Article  CAS  Google Scholar  * Lammer, C. et al. The cdc25B phosphatase is essential for the G2/M phase


transition in human cells. _J. Cell Sci_. 111, 2445–2453 (1998). CAS  PubMed  Google Scholar  * Yin, J-P. et al. Design and synthesis of paracaseolide A analogues as selective inhibitors of


protein tyrosine phosphatase 1B inhibitors. _Org. Biomol. Chem._ 12, 3441–3445 (2014). Article  CAS  Google Scholar  * Gravel, E. & Poupon, E. Biogenesis and biomimetic chemistry: can


complex natural products be assembled spontaneously? _Nat. Prod. Rep._ 27, 32–56 (2010). Article  CAS  Google Scholar  * Stocking, E. M. & Williams, R. M. Chemistry and biology of


biosynthetic Diels–Alder reactions. _Angew. Chem. Int. Ed._ 42, 3078–3115 (2003). Article  CAS  Google Scholar  * Hideaki Oikawa, H. & Tokiwano, T. Enzymatic catalysis of the Diels–Alder


reaction in the biosynthesis of natural products. _Nat. Prod. Rep_. 21, 321–352 (2004). Article  Google Scholar  * Kim, A. H. J., Ruszczycky, M. W., Choi, S-H., Liu, Y-N. & Liu, H-W.


Enzyme-catalyzed [4+2] cycloaddition is a key step in the biosynthesis of spinosyn. _Nature_ 473, 109–112 (2011). Article  CAS  Google Scholar  * Hashimoto, T. et al. Biosynthesis of


versipelostatin: identification of an enzyme-catalyzed [4+2]-cycloaddition required for macrocyclization of spirotetronate-containing polyketides. _J. Am. Chem. Soc_. 137, 572–575 (2015).


Article  CAS  Google Scholar  * Brophy, G. C. et al. Novel lignans from a _Cinnamomum_ sp. from Bougainville. _Tetrahedron Lett_. 10, 5159–5162 (1969). Article  Google Scholar  * Chapman, O.


L., Engel, M. R., Springer, J. P. & Clardy, J. C. The total synthesis of carpanone. _J. Am. Chem. Soc_. 93, 6696–6698 (1971). Article  CAS  Google Scholar  * Bandaranayake, W. M.,


Banfield, J. E. & Black, D. S. t. C. Postulated electrocyclic reactions leading to endiandric acid and related natural products. _J. Chem. Soc. Chem. Commun_. 902–903 (1980). * Nicolaou,


K. C., Petasis, N. A., Zipkin, R. E. & Uenishi, J. The endiandric acid cascade. Electrocyclizations in organic synthesis. 1. Stepwise, stereocontrolled total synthesis of endiandric


acids A and B. _J. Am. Chem. Soc._ 104, 5555–5557 (1982). Article  CAS  Google Scholar  * Noutsias, D. & Vassilikogiannakis, G. First total synthesis of paracaseolide A. _Org. Lett_. 14,


3565–3567 (2012). Article  CAS  Google Scholar  * Vasamsetty, L., Khan, F. A. & Mehta, G. Total synthesis of a novel oxa-bowl natural product paracaseolide A via a ‘putative’ biomimetic


pathway. _Tetrahedron Lett_. 54, 3522–3525 (2013). Article  CAS  Google Scholar  * Giera, D. S. & Stark, C. B. W. Total synthesis of (±)-paracaseolide A and initial attempts at a Lewis


acid mediated dimerization of its putative biosynthetic precursor. _RSC Adv._ 3, 21280–21284 (2013). Article  CAS  Google Scholar  * Boukouvalas, J. & Jean, M-A. Streamlined biomimetic


synthesis of paracaseolide A via aerobic oxidation of a 2-silyloxyfuran. _Tetrahedron Lett_. 55, 4248–4250 (2014). Article  CAS  Google Scholar  * Vasamsetty, L., Sahu, D., Ganguly, B.,


Khan, F. A. & Mehta, G. Total synthesis of novel bioactive natural product paracaseolide A and analogues: computational evaluation of a ‘proposed’ biomimetic Diels–Alder reaction.


_Tetrahedron_ 70, 8488–8497 (2014). Article  CAS  Google Scholar  * Adam, W. & Rodriguez, A. Intramolecular silyl migration in the singlet oxygenation of 2-methyl-5-trimethylsilylfuran.


_Tetrahedron Lett_. 22, 3505–3508 (1981). Article  CAS  Google Scholar  * Guney, T. & Kraus, G. A. Total synthesis of paracaseolide A. _Org. Lett._ 15, 613–615 (2013). Article  CAS 


Google Scholar  * Caramella, P., Quadrelli, P. & Toma, L. Unexpected bispericyclic transition structure leading to 4+2 and 2+4 cycloadducts in the endo dimerization of cyclopentadiene.


_J. Am. Chem. Soc_. 124, 1130–1131 (2002). Article  CAS  Google Scholar  * Ess, D. H. et al. Bifurcations on potential energy surfaces of organic reactions. _Angew. Chem. Int. Ed_. 47,


7592–7601 (2008). Article  CAS  Google Scholar  * Toma, L., Romano, S., Quadrelli, P. & Caramella, P. Merging of 4+2 and 2+4 cycloaddition paths in the regiospecific dimerization of


methacrolein. A case of concerted crypto-diradical cycloaddition. _Tetrahedron Lett_. 42, 5077–5080 (2001). Article  CAS  Google Scholar  * Gagnepain, J., Castet, F. & Quideau, S. Total


synthesis of (+)-aquaticol by biomimetic phenol dearomatization: double diastereofacial differentiation in the Diels–Alder dimerization of orthoquinols with a _C_2-symmetric transition


state. _Angew. Chem. Int. Ed._ 46, 1533–1535 (2007). Article  CAS  Google Scholar  * Miles, W. H. et al. Amine-catalyzed epimerization of γ-hydroxybutenolides. _Tetrahedron Lett._ 48,


7809–7812 (2007). Article  CAS  Google Scholar  * _CYLview, 1.0b_ (Université de Sherbrooke, 2009); http://www.cylview.org Download references ACKNOWLEDGEMENTS T.W. acknowledges the support


of a Wayland E. Noland Fellowship and a University of Minnesota Graduate School Doctoral Dissertation Fellowship. The computational aspects of this work were performed with hardware and


software resources available through the University of Minnesota Supercomputing Institute (MSI). Some graphical images were created using CYLview25. We appreciate receiving guidance from a


reviewer who encouraged us to explore in greater computational depth the Diels–Alder dimerization, which led to the identification of the fully symmetrical, bis-pericyclic transition-state


structure. Financial support for the research was provided by the National Cancer Institute of the National Institutes of Health (NIH; CA76497). NMR spectra were recorded on an instrument


purchased with support from the NIH Shared Instrumentation Grant programme (S10OD011952). AUTHOR INFORMATION AUTHORS AND AFFILIATIONS * Department of Chemistry, University of Minnesota, 207


Pleasant Street SE, Minneapolis, 55455, Minnesota, USA Tao Wang & Thomas R. Hoye Authors * Tao Wang View author publications You can also search for this author inPubMed Google Scholar *


Thomas R. Hoye View author publications You can also search for this author inPubMed Google Scholar CONTRIBUTIONS T.W. and T.R.H. conceived and designed the experiments, analysed the data


and co-wrote the paper. T.W. performed the experiments. CORRESPONDING AUTHOR Correspondence to Thomas R. Hoye. ETHICS DECLARATIONS COMPETING INTERESTS The authors declare no competing


financial interests. SUPPLEMENTARY INFORMATION SUPPLEMENTARY INFORMATION Supplementary information (PDF 6595 kb) SUPPLEMENTARY INFORMATION Crystallographic data for COMPOUND 1B. (CIF 21 kb)


SUPPLEMENTARY INFORMATION Crystallographic data for COMPOUND 7B. (CIF 15 kb) RIGHTS AND PERMISSIONS Reprints and permissions ABOUT THIS ARTICLE CITE THIS ARTICLE Wang, T., Hoye, T.


Diels–Alderase-free, bis-pericyclic, [4+2] dimerization in the biosynthesis of (±)-paracaseolide A. _Nature Chem_ 7, 641–645 (2015). https://doi.org/10.1038/nchem.2281 Download citation *


Received: 21 January 2015 * Accepted: 07 May 2015 * Published: 22 June 2015 * Issue Date: August 2015 * DOI: https://doi.org/10.1038/nchem.2281 SHARE THIS ARTICLE Anyone you share the


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